susan¶
- susan.read(filename)[source]¶
Read a SUSAN-supported file and return the appropriate object.
The file format is inferred from the extension.
- Parameters:
filename (str) – Path to the file to read.
- Returns:
The type depends on the file extension:
Extension(s)
Format
Returned type
.mrc.mapMRC volume
numpy.ndarray.ali.st.rec.ptclsrawSUSAN particles
.refstxtSUSAN references
.tomostxtSUSAN tomograms
- Return type:
numpy.ndarray or susan.data.Particles or susan.data.Tomograms or susan.data.Reference
- Raises:
ValueError – If the file extension is not recognised.
Submodules
- susan.data
- susan.modules
- susan.project
- susan.project.STA
- susan.project.SubtomogramGenerator
- susan.project.ProjectionExtractor
- susan.project.SubtomoAvg
- susan.project.SubtomoAvgMonitor
- susan.project.SubtomoAvgSched
- susan.project.SubtomoAvgN2N
- susan.project.SubtomoAvgBase
- susan.project.SubtomoAvgCore
- susan.project.Schedulers
- susan.project.diagnostics
- susan.ml
- susan.io
- susan.utils